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Base editing, a new form of gene therapy, sharply lowers bad cholesterol in clinical trial
活動日期:2023.11.24
2023.11.24  

Base editing, a new form of gene therapy, sharply lowers bad cholesterol in clinical trial

https://reurl.cc/x6VRKz

Verve Therapeutics says its twist on CRISPR could with one treatment help prevent heart disease, a major killer, in many people

CRISPR-Cas9-ABE gene editing complex, molecular structure

Base editing, a way to precisely change a gene’s sequence (depicted above), has helped some people lower their high cholesterol levels.RAMON ANDRADE 3DCIENCIA/SCIENCE PHOTO LIBRARY

 

A technique for precisely rewriting the genetic code directly in the body has slashed “bad” cholesterol levels—possibly for life—in three people prone to dangerously high levels of the artery-clogging fat. The feat relied on a blood infusion of a so-called base editor, designed to disable a liver protein, PCSK9, that regulates cholesterol.

“It is a breakthrough to have shown in humans that in vivo base editing works efficiently in the liver,” says Gerald Schwank, a gene-editing researcher at the University of Zurich who wasn’t involved in the clinical trial, sponsored by the biotech Verve Therapeutics. The approach is more precise, and possibly safer, than disrupting a gene with CRISPR, the gene-editing tool from which base editing is derived.

Reported today at the American Heart Association meeting in Philadelphia, the results mark the first time this CRISPR variant has been infused into people to treat a disease. The success is also a proof of principle for using gene editing for a common health problem like high cholesterol rather than a rare disease. Verve hopes its base editor could eventually be a one-time solution for tens of millions of middle-aged people who are struggling to control their cholesterol with daily drugs.

Some clinicians worry, however, that the treatment’s cost could be exorbitant—some approved gene therapies are priced in the millions—and prevent it from reaching many who could be helped. And the short- and long-term safety of base editing remains unclear. Two of the trial’s 10 participants, nearly all born with various gene mutations resulting in high cholesterol levels, had a heart attack or cardiac arrest, in one case possibly related to the treatment. “It worked. But we won’t know for years how safe this is,” says cardiologist Karol Watson of the University of California, Los Angeles.

Traditional gene therapy, which shuttles a therapeutic gene into the body, is becoming more common. CRISPR, too, has chalked up clinical victories. U.S. regulators are poised to approve the gene editor for the blood disorder sickle cell disease, and in small studies, an infusion of CRISPR has been used to shut off a liver protein to treat two genetic diseases.

But CRISPR works by severing both strands of DNA and letting cells themselves imperfectly repair the break. This can result in potentially harmful DNA rearrangements that could flip on a cancer gene. Base editors, a twist on CRISPR invented in 2016 by David Liu’s lab at Harvard University and the Broad Institute, are more precise because they nick just one DNA strand and swap out pairs of the four DNA bases.

In base editing’s first clinical test, researchers last year engineered donated immune cells in a dish to target a teenager’s leukemia, then infused them to put her disease into remission so she could get a stem cell transplant. In the Verve trial, however, the editing took place inside the body, specifically in the liver, a relatively easy organ to target because it sucks up foreign particles.

The trial subjects have a disease called heterozygous familial hypercholesterolemia (FH), usually caused by a defect in one copy of a gene that encodes a cell surface protein needed by the liver to clear the blood of low-density lipoproteins (LDLs), the “bad” cholesterol. People with FH must take daily statins and other drugs to control their cholesterol levels, but many struggle to keep to the lifelong regimen. Without any treatment, many would suffer heart attacks or strokes by age 50.

FH patients still make some LDL receptors, and Verve’s strategy is to keep those molecules around for longer by altering the liver’s gene for PCSK9, an enzyme that normally removes the receptors from cells. Its treatment consists of messenger RNA (mRNA) that instructs cells to manufacture the gene editor’s protein components. Packaged in tiny balls of fat called lipid nanoparticles—also used in the mRNA COVID-19 vaccines—it travels to the liver, where an additional RNA strand also carried in the particles guides the base editor to the gene for PCSK9. The combo makes a one–base pair change so that cells can produce only shortened, nonfunctional versions of the enzyme.

In three patients receiving the highest doses of the base editor, blood levels of functioning PCSK9 protein dropped between 47% and 84% and LDL levels have fallen between 39% and 55% for as long at 6 months. This is roughly comparable to the drop in LDL in patients given relatively new, injected PCSK9-blocking drugs, which some patients now take instead of statins.

However, two patients who already had severely blocked arteries had heart problems after the base editor infusion. One died from cardiac arrest, a case that Verve says a safety board found was unrelated to the Verve infusion. The other person survived a heart attack, but it came just a day after treatment and could have been related. The man, however, had chest pains prior to the trial that he didn’t mention. “Had he reported the symptoms to the investigators, he would not have been enrolled,” Verve CEO Sek Kathiresan says.

Some clinicians are also concerned about another potential risk of base editing. They note that like standard CRISPR, it could make changes to other, nontargeted genes. Endocrinologist Anne Goldberg of the Washington University School of Medicine in St. Louis, who treats FH patients, says that although the Verve treatment “could be a game changer,” she wants to see more safety data. “CRISPR in humans makes me a bit nervous,” she says.

Verve plans to test its treatment in a total of about 40 FH patients. Current participants are in New Zealand and the United Kingdom, but U.S. regulators recently cleared the way for testing after the company produced data indicating the editor would not alter DNA in sperm and egg cells. It expects to compare the approach with a placebo in a larger trial starting in 2025.

The company hasn’t detailed how much it would charge for the treatment, but Kathiresan has said it will be more affordable than some of the gene therapies with million-dollar price tags. He says the PCSK9 base editor could one day be used to treat people who don’t have FH but have early heart disease. It could even be given widely to older adults to ward off disease. “Down the road, maybe you turn 50, and this is what you get and it prolongs your life,” he says. “That’s the ultimate vision.”

The wait, however, could be long.


doi: 10.1126/science.adm8865

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